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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47556073, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNWYSKTKD QTLIDLETNE QQGLTEEIVN ERLKQYGSNE LATKQKRTLL QRIFAQINDV  60
   61 LVYVLIIAAL ISAFVGEWAD ASIIALVVVL NAVIGVVQES KAEQALEALK KMATPKAIVK 120
  121 RNGELKEIPS EHVVPGDIVM LDAGRYIPCD LRLIETANLK VEESALTGES VPVDKDAIYH 180
  181 PSMQSDEQVP LGDQKNMAFM STLVTYGRGV GVAVETGMNS QIGKIATLLH EADDDMTPLQ 240
  241 KSLAQVGKYL GFVAVAICIV MFLIGFLQGR DTLEMFMTAI SLAVAAIPEG LPAIVSIVLA 300
  301 IGVQRMIKQN VIIRKLPAVE ALGSVTIICS DKTGTLTQNK MTVTHFYSDN TYDQLESLNV 360
  361 NNDVQRLLLE NMVLCNDASY NNDSQTGDPT EIALLVAGTT FNMQKDHLEK IHERVNELPF 420
  421 DSDRKLMSTV HTYDESYYSM TKGAIDKLLP RCTHIFKNGK IEVLTDADKD QILEAAGSMS 480
  481 QEALRVLSFA FKQYNSNDVD IDHLEENLIF IGLVGMIDPP RTEVKDSITE CKKAGIRTVM 540
  541 ITGDHKDTAF AIAKELGIAE EISEIMIGTE LDNISDTELA NKIDRLHVFA RVSPEHKVKI 600
  601 VKALRAKGNI VSMTGDGVND APSLKQADVG VAMGITGTDV AKGAADVVLT DDNFSSIVKA 660
  661 VEEGRNIYRN IKKSILFLLS CNFGEIITLF LAILLGWATP LRPIHILWVN LITDTLPALS 720
  721 LGVDPEDPDV MKEKPRHAKE SLFSGSVPFL IFNGVVIGLL TLIAFIAGAK FYTGDTHLFP 780
  781 LFPEQIDEDA LLHAQTMAFV VLSFSQLVHS FNLRSRTKSI FSIGIFTNKY LVFSLLIGVL 840
  841 MQVCIISIPP LANVFGVHAL TMRDWGFVLL LSLIPLVVNE IIKLVKKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle