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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47556374, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQVKAEVMN RETYKMDWSY SNSKQREIKT EIIKTASGSI AYCLTPDLRS PNGDDLPEMG  60
   61 KTSDAVYRIL LNGYPQKSPT ELGVATTEEA HYATQLAVWI AANELTEEDL VAKNERVHNL 120
  121 MKRLVEASKK ETGSQDVFFK VNPVDSQTAT QKGDYLETGF YAVQTNAVSG SYTILPENAP 180
  181 KGLRIVNENG EEKSTLLING KFKILIPKNT SSGNFKMKVK STLTNLQAIA FKGSEKVQNT 240
  241 TVLLQRNSEK ISTDLVVNWE SVGSLKIMKL GEKKEVLKGA VFEVSNENFK QNVTTNDKGI 300
  301 AELGNLPIGI YSVKEIQAPT GYVLDGSVKK IEVKTGETAV LELKNENVKG ELEITKVDVA 360
  361 DGNMKLPNAE FTIYNEQGKE VVKGRTDEKG VAKFKLPYGK YTYKETIAPN GYVINEETFA 420
  421 FEIKENGQII KHIVQDKKVE GELEITKVDI ADGNTKLPNA EFTIYNEQGK EVVKGRTDEK 480
  481 GVAKFKLPYG KYTYKETIAP NGYVINEETF AFEIKENGEI IKHIVQDKKV EGELEITKVD 540
  541 VADGNTKLPN VEFTIYNEQG KEVVKGKTNE QGIAKFKLPY GKYTYKETIA PNGYVINEET 600
  601 FAFEIKEDGE IIKHIVQDKK VEGELEITKV DVADGNTKLP NAEFTIYNEQ GKEVVKGKTN 660
  661 EQGIAKFKLP YGKYTYKETI APNGYVINEE TFAFEIKEDG EIIKHIVKNK KEEKASLPSK 720
  721 PNKPTPNGEV KPSADVKQVQ QPNTHNEVRL PATGGVGNEF TVLFVLGLGF IIAGAYVLKM 780
  781 KNRKEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle