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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47566168, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKPFKVLS SIALTAVLGL SFGAGTQSAY AETPVNKTAT SPVDDHLIPE ERLADALKKR  60
   61 GVIDSKASEK ETKKAVEKYV ENKKGENPGK EATNGDPLTK EASDFLKKVK DAKADTKEKL 120
  121 DKPATGTSAA TGPVRGGLNG KVPTSPAKQK AYNGDVRKDK VLVLLVEYAD FKHNNIDKEP 180
  181 GYMYSEDFNK EHYEKMLFGD EPFALEDGSK IETFKQYYEE QSGGSYTVDG TVTKWLTVPG 240
  241 KAADYGADAA TGHDNKGPKG PRDLVKDALK AAVDSGIDLS EFDQFDQYDV NGDGNQKQPD 300
  301 GLIDHLMIIH AGVGQEAGGG KLGDDAIWSH RWTVGPKPFP IEGTQAKVPY WGGKIAAFDY 360
  361 TIEPEDGAVG VFAHEYGHDL GLPDEYDTDY TGHGEPIQAW SVMSGGSWAG KIAGTTPTSF 420
  421 SPQNKEFFQK TIGGNWANIV EVDYEKLNKG IGLATYLDQS VTKSARPGMI RVNLPDKDIK 480
  481 TIAPAFGKQY YYSTKGDNLH TTLETPLFDL TNATNAKFDF KSLYEIEAEY DFLEVHAVTE 540
  541 DGQKTLIEKL GEKANSGNAD STNGKWIDKS YDLSQFKGKK VKLTFEYITD GGLALNGFLL 600
  601 DNASLTVDGK VVFSDDAEGT PQFKLDGFAV SNGTEKKKHN YYVEWRNHTG SDSALKFARG 660
  661 PEYNSGMVVW YADLAYTDNW VGLHPGHGFL GVVDSHPEAI VGTLNGKPTI ESSTRFQIAD 720
  721 AAFSFDKTPA WKVVSPTRGT YTYNGLAGVP KFDDSKTYIN QQIPDAGRIL PNLGLKFEVV 780
  781 GQADDNSAGA VRLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle