YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47556713, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIWKVISN VISFVLFTLM VCLAFVVISS KASGGDPTVM GYQFKSVLSG SMEPTFLTGS  60
   61 IIAIEPTKDG SKYQKGDVIT FKEKDEKIIT HRIIGVKDTN GKVMYETKGD NNNGPDLEPV 120
  121 LAENVIGKYA DITVPYAGYA LNYANSKAGA ALLLIIPGVF LLGYSAISIF SAIRSIDGEK 180
  181 KEKKVEQSV

Type	Start	End	Confidence
Cytoplasmic	1	9	0.51
Transmembrane Helix	10	30	0.57
Non-Cytoplasmic	31	149	0.93
Transmembrane Helix	150	173	0.79
Cytoplasmic	174	189	0.82