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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47557784, gi|...
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFRSRLLF TFVSLIVFIL VGLGLLLETV FENYYIDHAK ERMVKETEYV AVLAEEQGFD  60
   61 DVLKNPYVFE KLEEKIQASI AFVDEKKKVQ YSGGEPSAFS QGIMKELSSE TTKQRNKVIT 120
  121 KETDQNNEFY HAVFVQDVAG KQGYILVKST IEPLKDVHQK TWGLLIIGFV IACLVVVFLG 180
  181 MKITGQYIRP IESVTKVAIE LAKGNYKARA YESHSDETGM LSKAINILAR NLQEMTLEQE 240
  241 MQQDRLHTLI ENMGSGMILI DSRGYINLVN RSYKETFHVT DEEYLDRLYY ESFHHPEIIE 300
  301 LVEEIFMTEV KVRKQMLLPL GIERKHFEVY GAPIIGTNHE WKGIVLVFHD ITELKKLEQM 360
  361 RKDFLANVSH ELKTPITSIK GFSETLLDGA MDNKKFCEHF LHIILKESER MQGLIEDLLD 420
  421 LSKIEQQGFK LNMGTVDMKG LLEDIHMVLD NKAGEKEISL QVNALKRVSV IGDPSRLQQI 480
  481 FINLMNNAIV YTPAGGVVSV ELAEDKYNAY IKVSDTGIGI SKDEIPRIFE RFYRVDKARS 540
  541 RNTGGTGLGL SIVKHLVEAH HGTITVDSEV GEGTTFTVVL PKSATEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle