YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148694840, gi...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EASRHRPGGS FHSPCVLGRC SPAFADPRVV NGRGGSMPGL WRQRLPSAWA LLLLPFLPLL  60
   61 MPAAPAAHRG SYKPVIVVHG LFDSSYSFRH LLDYINETHT GTVVTVLDLF DGRESLRPLW 120
  121 EQVQGFREAV VPIMEKAPEG VHLICYSQGG LVCRALLSVM DNHNVDSFIS LSSPQMGQYG 180
  181 DTDYLKWLFP TSMRSNLYRV CYSPWGQEFS ICNYWHDPHH DDLYLNASSF LALINGERDH 240
  241 PNATAWRKNF LRVGRLVLIG GPDDGVITPW QSSFFGFYDA NETVLEMEEQ PVYLRDSFGL 300
  301 KTLLARGAIV RCPMAGISHT TWHSNRTLYD TCIEPWLS

Type	Start	End	Confidence
Cytoplasmic	1	44	0.77
Transmembrane Helix	45	67	0.76
Non-Cytoplasmic	68	338	0.88