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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50809777
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMELPEGSG TPQVPLFAPG FVRLVGGDNR CSGRVEINDR EGWKSVCDSH FSAKAADVVC  60
   61 RDLQCGRALS VTRASPSGEG TGPIWDRELQ CVGNESTLSS CPTGTPKDQP CTQTSTAAVS 120
  121 CTRPPHNASL RLVGGGSRCD WRVEIFQRGT WGRVLDDQWD MEDASVVCRQ LRCGEAEAAY 180
  181 TVPRAERGTG PVGLRGVRCA GHEASLSLCN TSLPEATGIM EDVGAVCQGS RQVRLVDGAG 240
  241 RCAGRVEIYY RGQWGTVCDD AWDTADANVV CRQLSCGWAV EAAGSAHFGE GSGHIWLDGV 300
  301 NCSGDETALW NCSAEAWGQH DCGHKEDAGV VCSEFMALRL ENSDGCSGRL QVFYNGTWGS 360
  361 VGSNSMTPHT AKLVCKELGC GDGGSREISI FYGRVNGTAW LDHVQCGESN SSFWQCPSDP 420
  421 WELQSYDDVR DEANITCNGK RATRAQDPAS LTMTKASWGG ASRGPPCCPL HRFLHCYISF 480
  481 SREKAGKDAG SCVPQFHELH RWELLLCVTS GPVTLVPWEV TASADREKIR AVGGKDGCSG 540
  541 RVEVWHRGSW GTVCDDSWDM QDAEVACRQL GCGPAVSALA EAAFGEGTGP IWLEQVECRG 600
  601 TEPSLQACWA RTGDGGACRH KEDAAVNCLD PILDYATISR RVSVPVIICI IVGLLICLLL 660
  661 ALRARHVQIA RNSTQSQVPV VPAVSSAKKM AVPGKTHGEG TTKSTAPPVG PAQAIKAHRC 720
  721 KEEQGAAKLA LSSQGQHKVT AKGEAPEPGR THGVEAQRCK EERAAVKLAL ISQFQGKHTA 780
  781 KAPAQGSGRA QAVEPQWLRK QGAVKPALTT SQFQGKLAAK GKESEMRPAQ PIKAQRGKDE 840
  841 ERGAAKPALA SQFLGKYTAK ASAPEAGRAQ AVESESHRGG RAGEKIFCDG RVLEANKELS 900
  901 GPHGAQPPMI IPTIVIESPS SSEHSLPEEP IYDTSLLMPP PRIHKRRRSR ERAQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle