YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30315013, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHIFKIMAL LVAIAALWIG LLQTSMIPQS YALLLPIYSV VTLGCYGLLM VGVGLMQFPT  60
   61 CPQEALLLQQ DIIEAKEFLQ RKGVDVGSG

Type	Start	End	Confidence
Cytoplasmic	1	6	0.77
Transmembrane Helix	7	27	0.81
Non-Cytoplasmic	28	33	0.70
Transmembrane Helix	34	56	0.79
Cytoplasmic	57	89	0.80