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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CER3_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAFLSAWPW ENFGNLKYLL YAPLAAQVVY SWVYEEDISK VLWCIHILII CGLKALVHEL  60
   61 WSVFNNMLFV TRTLRINPKG IDFKQIDHEW HWDNYIILQA IIVSLICYMS PPLMMMINSL 120
  121 PLWNTKGLIA LIVLHVTFSE PLYYFLHRSF HRNNYFFTHY HSFHHSSPVP HPMTAGNATL 180
  181 LENIILCVVA GVPLIGCCLF GVGSLSAIYG YAVMFDFMRC LGHCNVEIFS HKLFEILPVL 240
  241 RYLIYTPTYH SLHHQEMGTN FCLFMPLFDV LGDTQNPNSW ELQKKIRLSA GERKRVPEFV 300
  301 FLAHGVDVMS AMHAPFVFRS FASMPYTTRI FLLPMWPFTF CVMLGMWAWS KTFLFSFYTL 360
  361 RNNLCQTWGV PRFGFQYFLP FATKGINDQI EAAILRADKI GVKVISLAAL NKNEALNGGG 420
  421 TLFVNKHPDL RVRVVHGNTL TAAVILYEIP KDVNEVFLTG ATSKLGRAIA LYLCRRGVRV 480
  481 LMLTLSMERF QKIQKEAPVE FQNNLVQVTK YNAAQHCKTW IVGKWLTPRE QSWAPAGTHF 540
  541 HQFVVPPILK FRRNCTYGDL AAMKLPKDVE GLGTCEYTME RGVVHACHAG GVVHMLEGWK 600
  601 HHEVGAIDVD RIDLVWEAAM KYGLSAVSSL TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle