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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50806943
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRVLRRLLP ALCSAWPAAL LAPRALLAPR ASPMALRPAA AEAGGGEKPS VATDSTPKHD  60
   61 GLENMQQEKK IVKGNKKRTQ EGKKPCPPAD SVDSLMAEMP FADIDIEDEF AKHTTSEINT 120
  121 EKKRKRTTGK EIPEGSERKK KKKKQYQPNY FISLPITNPE IAGNIRAVQD AIIQKDDRLS 180
  181 KAMVHCGSLH VTMLVMHLSS KEEISIAVGA LADSKDFVED LLKGKTVDLS FQGIDHFKNE 240
  241 VAFVQLAEND HTAALSEIAE TMRKIFQEKG ILAGEERAFK PHLTFMKLSK SIQLRKQVKK 300
  301 IDSSLYEDYK SHYFGDEILH RFDLCSMLKK KQPNGYYYCE SSVFLDLGIH GGLENNSCNN 360
  361 GGVVNISEEK EKAETWRKSG RAWYRYGPGV KALVEVTHDS AQELTSLSHC GGVGPSWPLL 420
  421 AGLSAREQTL ALRGSPVPTQ PCVSESNTGL RELFSHYSHD DTSLALLLHF SIKDMCVVLM 480
  481 KSALGKSESL LSGKLQRHKA GLSRIWAQAL VCVHYFKTMI LTVLDDSQTA TRVGSIQSGE 540
  541 KHAAEPDDAE LVSLSKRLVE NAVLKAVQQY LEETQNKARQ TDGSPVKAEE AASGTKSESN 600
  601 NDNSKNGHEE ALPQVETMPC AQPGTATGLL AGHKGTCCCG VSSRHPELKI TTTDTRHRYY 660
  661 YTVCNIAGVS LKCDTFLFCI SGKSHEADLV KEALHRETQA LLSRLSQIKE LLSTPEVRMK 720
  721 IRKELFEDGH NRNNNASLEE CLEVVMHRLF WESVGIKNRW CKRIHVLFSV LVHAPYYFCT 780
  781 AGYGDVCDGS KAASKSGWNS LGCCDPKMHL GAFISDTSPV APHQYGHNFT ASNQENNGFQ 840
  841 IIHSSAALEG ISSDEGTAQL KRISMNVELA LCAELLQDMG FPKTNAPSPP IISHPHPGLG 900
  901 PGAEAVWKDP LALRHSLCAL MTGFTNVLIS SDEGTAQLKR ISMNVELAVC AELLQDTGIR 960
  961 KTNARSAAII SHPHPGSGRG RRQRELSGRE AAELSAVRAQ PSSRQAEGRG ERCVAAAMGQ1020
 1021 LCCFPFSRGE EKISEKHAAE PDDAELVSLS KRLVENAVLK AVQQYLEETQ NKARQTDGSP1080
 1081 VKAEEAASGT KSESNNDSSK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle