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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DHKK_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIELNNHSKI NKNENNTNTR NNSSNNNNNN NNINKTNTNK YFEYNQNSII YSSIPNSFLS  60
   61 HHPNSVGSQC LSLNSFLPPK PPILLSIFNS DTIGNNNNNN YSSSSSRNNS SGCSSSNNNN 120
  121 NNNNNNNNNN NNNNNNNNNN CNIEQYKNNQ KQPKQQQQQK DQTIATQHRI SLSSSSSSSS 180
  181 LSSSSSSSSV KQSFQIVKRL FGSLSEYMFP QKDEILYETD PYYLYQDDTQ SNDSNEFYDD 240
  241 TDIGSDIDEA NLNNTYNIQN CNKTLYNKQQ QQAHFVNMNK NVNSNNGTGN SNQSNNVNKN 300
  301 QQNNNNNNNN NSHNNNNGNQ NSSSSSSNSG ASGSGGNGNN NNNNNNNNNN NNNNNNNSNS 360
  361 NSNNNSKSNN NNKKEGKDGA TMNGSHPLIP FRKKPAQVPS PCFRMNSPNS DNDQYLDQLA 420
  421 LENSSKKSLV VYNTDNLDQW KHSHLNENFD ILQNDLIDIQ QQQQQQQQQD NTLQYSSPIN 480
  481 KRQEQEQQHI PFQFTTEQQQ QLQQQQQQQQ QNKTKQHPIL LQRQQQQKQK QQQQQQIQQE 540
  541 QIGNNNSNNN NNINNNNNIN NNYNNVNDLM NKFEIDQKQH DSQQNLVEEK RTPSFHEHNI 600
  601 IFNSFNFICS IVLDGSNIKS TEKYKAKLII GFCFTILSFI PSWIIFFWLS GINKPAVMAI 660
  661 IAMPMSISSL VILKRTGSIH YPCHILCFTL CFALTINSYY TGGHQSTIRL LMSTVPIISA 720
  721 LVLGRKASIQ WSLMVLSIYL LFFVANLYGH EYVQGIPSII IRSHMNFIID VTIIIMTLIF 780
  781 TLCYQYFIDE AHRETKLKNA QLTIAKDAAI EAYQARQEFL ATMSHEIRTP LNGLIGMATL 840
  841 LRDSHNLPPE EKTMAKAVKS CGDILLRLVN DILDLSKLEA NQMGLEHIPF RMRELTQQIC 900
  901 HVLSGQANEK NIHLSCEVSD KIPSILLGDS GRILQILMNL TGNALKFTQS GYVKIIIDLI 960
  961 EEESELVSLK KGEYNISFRV KDTGIGVPVE SHQKIFEAFV QADPSDSRKY GGSGLGLYLC1020
 1021 AKLVRLMKGE IGVYNNPDCD GSTFWFILPL EEGTDQSMQQ MNNGARHKAF PQDCVKVLIA1080
 1081 EDNIINQRVA VKFLEKIGIK AEVAGNGNEV LEILERQHYD LIFMDFQMPI LDGLRCSKTI1140
 1141 REFEQNHKWN RICPSIFICG LTANTMSTDK KRCFDHGMNH FISKPFQLEQ LRSAIEMAIE1200
 1201 HKQRNLMNLN IRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle