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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UPAR_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.63
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLRRRLLL LVVVVTTCVP ASQGLRCIQC ESNQDCLVEE CALGQDLCRT TVLREWEDAE  60
   61 ELEVVTRGCA HKEKTNRTMS YRMGSVIVSL TETVCATNLC NRPRPGARGR PFPRGRYLEC 120
  121 ASCTSLDQSC ERGREQSLQC RYPTEHCIEV VTLQSTERSV KDEPYTKGCG SLPGCPGTAG 180
  181 FHSNQTFHFL KCCNFTQCNG GPVLDLQSLP PNGFQCYSCE GNSTFGCSYE ETSLIDCRGP 240
  241 MNQCLEATGL DVLGNRSYTV RGCATASWCQ GSHVADSFQT HVNLSISCCN GSGCNRPTGG 300
  301 APGPGPAHLI LIASLLLTLR LWGIPLWT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle