YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AGAL2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLSFSLRF IAFTLTITLT QIADGFQSRM LMNNGLALSP QMGWNSWNHF QCNINETLIK  60
   61 QTADAMVSSG LSAIGYKYIN IDDCWGELKR DSQGSLVAKA STFPSGIKAL SDYVHSKGLK 120
  121 LGIYSDAGTL TCSQTMPGSL GHEEQDAKTF ASWGIDYLKY DNCENTGTSP RERYPKMSKA 180
  181 LLNSGRSIFF SLCEWGQEDP ATWAGDIGNS WRTTGDIQDN WKSMTLIADQ NDRWASYARP 240
  241 GSWNDPDMLE VGNGGMTKEE YMSHFSIWAL AKAPLLIGCD LRSMDKVTFE LLSNKEVIAV 300
  301 NQDKLGIQGK KVKKEGDLEV WAGPLSKKRV AVILWNRGSA SANITARWAE IGLNSSDIVN 360
  361 ARDLWEHSTY SCVKKQLSAL VEPHACKMYT LTRRKA

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	396	0.99