YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47093159, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAKSKVAR IENRYIKDTA TMEKTRSRRR IALFRRLAFM AIIFAVVGGL LTITYTKQVL  60
   61 TLKEKKEKQV QVDKKMVAMK DEQDSLNEQI KKLHNDDYIA KLARSEYYLS KDGEIIFNIP 120
  121 EENSKQKE

Type	Start	End	Confidence
Cytoplasmic	1	31	0.99
Transmembrane Helix	32	55	0.89
Non-Cytoplasmic	56	128	0.99