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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42561755, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKARVLLKP SSLTTCLTRA KAFFSSVSQS RSISHQMEMG PSDSERYCYD PVLRWNPEVE  60
   61 DYFTKAYGPD HFARISKALT RPSSYSCIRV NTVKTTSDAV IEKLTKILND SEEGLKLVQP 120
  121 DGSSPVTKCQ IPGLDYVVFV NGSGPHKIEY DSGLENPPKE VLVSRKCAEA VLRGAQVYVP 180
  181 GVLACTAHVE KGDAVAVCVA MEQPGDEGDW SVNMTRGTTL QGLPTDPYYR ERSGLYIGMG 240
  241 TAMLSRAGMF RVPNGIAVDL NHRVFRLPSL HNILEGEIFL QNLPSIIVAH ALDPQKGERI 300
  301 LDMCAAPGGK TTAIAILMND EGEIVAADRS HNKVLVVQNL SAEMGFTCIT TCKLDALKSV 360
  361 CLPTTLNEST ILINGDNSSS MTSHSELSSN EEMTSVTSRR SEADKSCEKN DSTEQPNGGD 420
  421 NVSQAYIRKN KGRLKNGRGR TQCQGGRAGK SQGFPPNSFD RVLLDAPCSA LGLRPRLFAG 480
  481 LETVVSLRNH GWYQRKMLDQ AVQLVRVGGI LVYSTCTINP SENEAVVRYA LDKYRFLSLA 540
  541 PQHPRIGGPG LVGRCEFPDG YIEEWLKPGE EELVQKFDPS SELDTIGFFI AKFSVGPKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle