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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB11G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.29
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT  60
   61 MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL ASRLAANAFL SGTVLLNGRK 120
  121 TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC 180
  181 ADTVIGNWHL RGISGGEKRR VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR 240
  241 DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH 300
  301 FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV 360
  361 EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG YYWLRLLIYI LVTVCIGTIY 420
  421 LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN 480
  481 TLSATPFLIM ITFISGTICY FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF 540
  541 LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD 600
  601 SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG 660
  661 YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA RRW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle