YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23297558, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSKTLTLL VFSAVILTVA LGGDSGGSGN TNTIYSPCSD TRIQRSDGFT FGIAFSSRPS  60
   61 FFINQTVLLS PCDRRLSLAA MNSQFSVFRP KIDEISLLSI NTSAFFPDNY GGYMVAFAGR 120
  121 KYAARSIPAF IANSTFIVTS FTLVMEFQKG RLQNLYWKRD GCASCKGNQN FVCLNKQDCA 180
  181 IRTPSCKGRG GAVDCSLGIQ LAFSGTDKHL AVLNSWYEVE NLKQYSLYGL YSNLKSSLTN 240
  241 QFNNFF

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	246	0.98