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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBR1_ARATH
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVQPPVTP PIEPNGKRSE ASLLDICEKV LSLDGSTCDE ALKLFTETKR ILSASMSNIG  60
   61 SGTREEVERF WFAFILYSVK RLSVRKEADG LSVSGDNEFN LCQILRALKL NIVDFFKELP 120
  121 QFVVKAGSVL GELYGADWEN RLQAKEVQAN FVHLSLLSKY YKRGFREFFL TYDANAEKNS 180
  181 ANSSTYLLDS YRFGWLLFLA LRNHAFSRFK DLVTCSNGVV SILAILIIHV PCRFRNFSIQ 240
  241 DSSRFVKKGD KGVDLVASLC KIYDASEDEL RIVIDKANNL VETILKKKPS PASECQTDKL 300
  301 DNIDPDGLTY FEDLLEETSI STSLITLEKD YYDGKGELDE RVFINEEDSL LGSGSLSAGA 360
  361 VNITGVKRKI DALSSPARTF ISPLSPHKSP AAKTNGISGA TKLAATPVST AMTTAKWLRT 420
  421 VISPLLPKPS PGLEHFLKSC DRDITNDVTR RAHIILEAIF PNSSLGAQCG GGSLQAVDLM 480
  481 DDIWAEQRRL EACKLYYRVL EAMCKAEAQI LHANNLNSLL TNERFHRCML ACSAELVLAT 540
  541 HKTITMLFPA VLERTGITAF DLSKVIESFI RHEDSLPREL RRHLNSLEER LLESMVWEKG 600
  601 SSMYNSLIVA RPSLALEINQ LGLLAEPMPS LDAIAALINF SDGANHASSV QKHETCPGQN 660
  661 GGIRSPKRLC TDYRSILVER NSFTSPVKDR LLALGNVKSK MLPPPLQSAF ASPTRPNPGG 720
  721 GGETCAETGI NIFFTKINKL AAVRINGMVE RLQLSQQIRE SVYCFFQHVL AQRTSLLFSR 780
  781 HIDQIILCCF YGVAKISQMS LTFREIIYNY RKQPQCKPLV FRSVYVDALQ CRRQGRIGPD 840
  841 HVDIITFYNE IFIPAVKPLL VELGPVRNDR AVEANNKPEG QCPGSPKVSV FPSVPDMSPK 900
  901 KVSAVHNVYV SPLRGSKMDA LISHSTKSYY ACVGESTHAY QSPSKDLSAI NNRLNNSSSN 960
  961 RKRTLNFDAE AGMVSDSMVA NSLNLQNQNQ NQNGSDASSS GGAAPLKTEP TDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle