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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15242236, gi|...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLQILWLFR KIFIITYIFH ASCSPDKAGY YSFMKDATLA PMFARFDYII IGGGTSGCAL  60
   61 AATLSQNASV LVLERGGAPY DNPTATDIEN FATTLSNTSP KSWSQLFISE DGVYNTRARV 120
  121 LGGGSVLNAG FYTRAGDEYV KETEWKTDEV EAAYEWVEKK VAFQPPVLGW QTAFKDGLLE 180
  181 AGEFPYNGFT YDHIYGTKIG GTIFDRAGHR HTAADLLEYA NPGNIVVYLH ASVHKILFTT 240
  241 KGRPRPKAYG VIFQDANGVL HKAELEKNSM NEVILSAGAI GSPQLLMLSG IGPAAHLAAH 300
  301 GIKPLVLDHP MVGQGMGDNP MNAIFIPSPT PVEVSLIQVV GITKFESYIE GASGVIFSYS 360
  361 WTRRFFDGVL NYLNEMQTSR TTSTTSPTLS TQSITDFFNP INPLLNATTR AGLILQKIAG 420
  421 PISRGHLELR NTNPDDNPSV RFNYYQEPED LQICVEGINT IIKVINSKAF SKFKYPDATI 480
  481 HGLLDLMLSV PTNLRPRHIT SMFNLRQFCI DTVMTIWHYH GGCQVGRVVD KNYRVLGIDS 540
  541 LRVIDGSTFL KSPGTNPQAT VMMLGRYMGQ RILQEREIYN KPDKEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle