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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30102468, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVAVIGSGI SGLGSAYVLA NQGVKEVVLY EKEESLGGHA KTVRFDGVDL DLGFMVFNRV  60
   61 TYPNMMEFFE NLGVEMEVSD MSFAVSLDNG KGCEWGSRNG VSGLFAQKKN VLNPYFWQMI 120
  121 REIVRFKEDV LKYIEELEGN PDIDRKETLG EFLNSRGYSE LFQQAYLVPI CGSIWSCPSD 180
  181 GVLSFSAYSV LSFCCNHHLL QIFGRPQWLT VAGRSQTYVA KVRTELERLG CRIRTSCDVK 240
  241 SVSTSENGCV TVTSGDGSKE VFDRCILAMH APDALRLLGE EVTFDESRVL GAFQYVYSDI 300
  301 YLHHDIDLMP RNQAAWSAWN FLGSTEKKVC VTYWLNILQN LGENSEPFFV TLNPDETPKK 360
  361 TLLKWTTGHP VPSVAAWTAS QELHKIQGKR NIWFCGAYQG YGFHEDGLKA GMAAARGLLG 420
  421 KETALLNNPR HMVPSLTETG ARLFVTRFLG QFISTGSVTI LEEGGTMFTF GGKDSTCPLK 480
  481 SILKIHSPQF YWKVMTQADL GLADAYINGD FSFVDKESGL LNLIMILIAN RDTKSNLSKK 540
  541 RGWWTPMFLT AGLASAKYFL KHVSRQNTLT QARRNISRHY DLSNELFGFF LDDTMTYSSA 600
  601 VFKSDDEDLR TAQMRKISLL IDKARIEKDH EVLEIGCGWG TLAIEVVRRT GCKYTGITLS 660
  661 IEQLKYAEEK VKEAGLQDWI TFELRDYRQL SDAQKYDRII SCEMLEAVGH EFMEMFFSRC 720
  721 EAALAENGLI VLQFISIPEE RYNEYRLSSD FIKEYIFPGG CLPSLARVTT AMSSSSRLCI 780
  781 EHVENIGIHY YQTLRLWRKN FLARQKQIMA LGFDDKFVRT WEYYFDYCAA GFKTLTLGNY 840
  841 QLVFSRPGNV AAFADSYRGF PSAYCVT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle