YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50796088
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLTAAYPL KYSVPKARVF VVFLSMVFCT AVLCLLQLRF FKPKTKDFYS FEIKDSRGRI  60
   61 VSLEKYRGKA TLVVNVASYC QHTDKNYIAL QDLHREFGPS HFTVLAFPCN QFGESEPGSS 120
  121 QEIEAFAKGN YGVTFPVFHK IKILGSEAEP AFKFLIDSSK KEPRWNFWKY LVSPEGKVVK 180
  181 FWRPEEPIES IKPEIASLIR QIIMKKREDL

Type	Start	End	Confidence
Cytoplasmic	1	18	0.52
Transmembrane Helix	19	41	0.78
Non-Cytoplasmic	42	210	0.67