YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13878031, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHTLSLLPF LFIIIISSFH VLPVSPTPSH KLKSATTIRK LNRGGPYIGL VTVIATEENA  60
   61 FLRSVDFRPD PTHPFLDLSG RRFRIGKIHG KKVVYVRCGR GMVNGAAATQ QMIDVFNVKG 120
  121 IVHFGIAGNM NNSMSIGDVS IPKQITNAGL WDWLNPDKVK GVEDIAYLDV GNYNVPKGDG 180
  181 DNELGSIGYN YEQLYSVTGH INAPQNVFWI NTTQEWLHLA ADLEKMELSQ CVNASLCLPK 240
  241 KPKLVVGLKA ATAYIFVDNA AYRNFLYDTF GVSSSDMESS AVAMTCASNG YPIIVIRGLS 300
  301 DLAGEGGDNT VHKFGSLAAT NTAKAVLEFI RKLPPY

Type	Start	End	Confidence
Signal Peptide	1	23	0.59
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	336	0.92