YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50795800
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDRNLQCFT APPQLLKAAK AVSDRGAEGN HTERPSRNKA NLTPRSPRPA HEKVISPTSR  60
   61 VHSREPHSPP HLRQRHDCHH NTDPTTRRAN RLPPFEATNQ APPGARKAQS QEPYLSFPPL 120
  121 SSEETSGRAW PGTSALPALW FGFAVLGSAW LGSSFLEQKW KFPQIVLLLK SSLRKMHPDL 180
  181 SPHLHTEECN LIISLLKKCH KEHNVLRFFG HCNDIDREMR KCLKKEYEEK RARNREVRRK 240
  241 IIDAHKNFEK

Type	Start	End	Confidence
Cytoplasmic	1	131	0.65
Transmembrane Helix	132	153	0.79
Non-Cytoplasmic	154	250	0.74