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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30088964
Protein type: Globular with Signal Peptide
Type Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPHSISAL STTLTLSSSV NKPTTNKVNS FPFLSNKGTQ FFTKQTRPRS GRSPLLTPAR  60
   61 VAAPPSTVET DQSFPETEKG ETEEEFNEES SSSKFTWRDH WYPVSLIEDL NPLLPTPFQL 120
  121 LGREIVRTTS PLPKWVAFDD KCPHRLAPLS EGRIDEDGKL QCSYHGWSFD GCGSCVKIPQ 180
  181 AASEGPEARA VGSPKACATR FPTLVSQGLL FVWPDENGWE KASASKPPML PDEFEKPEFA 240
  241 TVNIQRDLFY GYDTLMENVS DPSHIEFAHH KVTGRRDRAK PLPFKMDARG SWGFSGANEG 300
  301 NPKISAKFVA PCYYMNKIEI DTKLPVVGDQ KWVVWICSFN VPMAPGKTRS IFSARNFFQF 360
  361 TVPGPAWWQV VPRWYEHWTS NKVYDGDMIV LQGQEKIFLS KTKEGDDINK QYTSITFTPT 420
  421 QADRFVLAFR NWLRRHGNGQ PEWFSSIPDL PLPSTVLSKR EMLDRLEQHT LKCSSCKEAY 480
  481 EGFQIWQKVL IGATVIFCAT SGIPADVQFR VLLAGLAIVS AALAFTLNQL QKNFEFVDYV 540
  541 HAEIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle