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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60467553, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFAGRISLD AFDSSHGGSS ESPEIHTLYR VSGSLALLSC IGALFVIITF ITIKDLKKHP  60
   61 TRMIFFLSVC DVLFSLKYLV TAVLPHSDSF QTKRVACYLQ AGIQQFFGLA SIGWSGMISL 120
  121 NLIISTSRPF ENSSTYSKFY HGWIWSYSIV TSAILFKNYD VIGPSGDGTC WIKAEDKPLL 180
  181 LMFFIPLLAY FSISISSLII AAISTRNKSL TSSTTNNSWS DRNRTGMLLR MSTYTLVFIL 240
  241 CWAGPLAHRI SQIAGHHDAP NQASVLMFFD AIGVSIQGFM NALIWITNPS ILRGFLGNIM 300
  301 KYLPFSKKFI KDGENTPLIR SLQDENQDPT QLAVMLRNNI LTCSLRGIAL SVNDNLNLSN 360
  361 SSSLNNNNNQ SHIGGDIHQH LPFDSLSSSS PSSSSTPINH NYNSNNNINN NNNNSNDNFD 420
  421 NINEQFKVYT EKELFKDIFD ISPDTNMGSH KFKDYCPNIF AKIRALNNIT PSDYLKSFDS 480
  481 SLFFENLSNQ KFSEGKSGSF MCFSPDNKFL IKTITRQESV LLKKKINNFY NYLVKNNHSF 540
  541 LLRFYGCHKI SMPNDHTIYL AIMSNVFGTI PQGIKIRERY DLKGSKVNRG GNDPLFKGDG 600
  601 LGLDLDFVNF RKFLNLPDGF SHSIIQQLKN DSAFLTSLNI MDYSLLIGVI PNNDDFKKKL 660
  661 IESGGNINNI LSGSNLNNNN SNSNSNGIGS GSSGSNFNNN NNGHGSGGLL KGSFTNSSLI 720
  721 SNSFDFSNGI ISADEKEIYY IGVIDILQLY DFSKKLERFL KVYLFRKDGD GISATRPEPY 780
  781 KQRFLKRMNE IIKNKNYKHK SATQQYNNSI INSNNNYYHN EEEVLFDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle