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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16422147
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHYGKTVA LNNITLDIPA RSMVGLIGPD GVGKSSLLSL ISGARVIEQG NVIVLGGDMR  60
   61 DAKHRRDVCP RIAWMPQGLG KNLYHTLSVY ENVDFFARLF GHDKAEREAR ITELLNSTGL 120
  121 APFRDRPAGK LSGGMKQKLG LCCALIYDPE LLILDEPTTG VDPLSRAQFW DLIDSIRQRQ 180
  181 TNMSVLVATA YMEEAERFDW LVAMNAGEIL ATGSAQQLRA KTHSATLEQA FIALLPEAQR 240
  241 QAHKPVVIPP YHAEQEEIAI EAKDLTMRFG KFVAVDHVNF RIPRGEIFGF LGSNGCGKST 300
  301 TMKMLTGLLP ASEGQAWLFG QPVDPNDIDT RRRVGYMSQA FSLYNELTVR QNLELHARLF 360
  361 HIPPAEIPAR VAQMIERFML TEVEDTLPAS LPLGIRQRLS LAVAVIHRPE MLILDEPTSG 420
  421 VDPVARDMFW QLMVDLSRQD KVTIFISTHF MNEAERCDRM SLMHAGKVLA SGTPQELVQQ 480
  481 RGAANLEAAF ISWLQEAAGA APETPIPPSQ TPAASGKPSR QGLSFRRLFS YSRREALELR 540
  541 RDPVRSTLAL LGTVILMLIM GYGISMDVEN LRFAVLDRDQ TVSSQAWSLN LAGSRYFIEQ 600
  601 PPLASYDELD RRMRSGELAV AIEIPPNFGR DIARGTPAQI GVWVDGAMPS RAETVKGYVQ 660
  661 AMHQSWLQEA ASRQPNPVKQ VGLLNIETRY RYNPDVKSLP AIVPAVIPLL LMMIPSMLSA 720
  721 LSVVREKELG SMINLYVTPT TRSEFLLGKQ LPYIALGMLN FLLLCALSVF VFGVPLKGSF 780
  781 LTLTLAALLY VIIATGLGLL ISTFMKSQIA AIFGTSIITL IPATQFSGMI DPVASLEGPG 840
  841 RWIGEIYPTS HFLTIARGTF SKALDLSDLW PLFMPLLIAV PVVMGLSILL LKKQEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle