YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66475364
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLPNMYFLVK LLAQIITRTF FKNVTVLGKE RIPLYGPVLF VGNHMNQFVD AAMLIAIFPR  60
   61 QIRFLIAEAS FKRPIIGRLA QSAGCIPVQR PQDLRYRGIG GLIWSSSSDV RIRGIKTRFK 120
  121 IDVKFQDTLI IDDLGVSRKV LEVVSDDEII IDKGIGTEYS ATYTDGFPFF IMPKIDQSTV 180
  181 YEEVSDAMRN GHSIGIFPEG GSHDRTTLLP LKPGVAVMAL SSVLEGAEDL LIVPVGLNYY 240
  241 EPHKTLSSAV VEIGQPIPVT LELAQKYEES PSDAVKELLS MVEKGMNSVL LSARDYTTLT 300
  301 CIRLCVQLYP PDRTALSQDN YYLLHQLFSQ FFWALHDDPE LEHLRKDLCE YEDTINHYGV 360
  361 PDREVWQLKQ PVYECIKLII TKFLLLILVS IVGGSFFPLW APIRYIPAFM AERHRKKALA 420
  421 NSKVKIRGTD VLASYRILVI IALLPMLTVF YGIFFSLAFM HGQNLNSKIA TVIGVFIILP 480
  481 PIFYISRVSF EMIMPLTRNI RTLFYVVVSN INYLRGTERT LLHMRIKLQQ KIRDLVYTKG 540
  541 PQVSPNFIQS FTTVVPDAVI QADNKRINYS LGEYVPVVTR AKYDAREEIL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle