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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66357500
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKLMLINFL LKWIIFSYIV INNINGIKSI NTSNSVFPYS EQRNIFTDSL MLFVVDHLEC  60
   61 IEKAKKDVIE KFNNDAKLQS IGLYRRIRVE LRKKEEIKFI KEVSKMRPFS GLFPVLVGEV 120
  121 IDNSINYCIY KYVDINMWSG FKYGKKLPKE LIKDLDKDLL ENNTISILLF KGVWYIYEGK 180
  181 GYYSPIRIGE NMQHIGIFSY SGIISSLHYI FIREEYREKS IIDNLGSHRK KKIDIDQNKM 240
  241 ELLRQEFIFR RSLMNTINKE QDERMDMDAR QMVILRDKIN NDLKMEAVRN AGKSSVDSQE 300
  301 DCLNCNDIFK CPNCDLEIFP SENEIEFNSL VILKNRGFWY EDTVSSSNTR FQINLPFYDK 360
  361 MDLEKYNIYC NGNSFSTKDK IERDNGLKKE VISLPAEDIS PIFDSDIDGE DHYYNNENDL 420
  421 SYGLTSLKDS GINQSNFSSS KSSSLGIANS QNSPQELFSL GSQNSPNSKD SHSNSFSKLN 480
  481 SQISSSTFIL EPSKPITNNK FDVSNPDSKD SKKSLKRLPR PFGGSHLTSV DNTFVDSSLS 540
  541 QKAASPVITH VEPSKDPSLS QKVVSPTSVP ASAPASASAP GSYISQVEPS RDPSLSQIVA 600
  601 SPTSIPASVP NSAPGLYISQ VEPSRDPSLS QAVVFSTSVP ASVPASVPAS VPASASAPGS 660
  661 YISQVEPSRD PSLSQTMVSS TSVPASAPTP GPAPVPAPNP SLATYPTPVP HPVPGPTLAP 720
  721 TALTYLAPPY PIPTSFAYPT PTPYPYLYPY PYHLTPFPYS PVPFPYPAQN SSLTPISNQT 780
  781 QYSTNNTTNG ITLEPNSNKN ATERSKSQNP DQSSEMSHSK KQDFSPSYRE SSITSSRKEK 840
  841 KRSKSGSKSR SKPRSRSRSQ NSKEKQEFQN NKKVKKRSQN SPNPKQSFLE KREQKRKRRS 900
  901 ESEYSQYNSK LRSKSETIQI TSKKHSHNLE IQVPTIKVKF MIDEERIIQD LIKTKQKENF 960
  961 DSIYQSISFN QQIQEFIEFE SFWSNRKHSI INLTNNTYIY NL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle