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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46101730, gi|...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTSASAVEP ALGGGPTRNL GVTPPIATNG PTSREIEVTK TLVAELEKQG VFESDEESKI  60
   61 REVILGKLDA MVKDFVYRVS ISHGMSETLA RSAGGKIFTF GSYRLGVHGP GSDIDTLCVV 120
  121 PKHVQREDFF SVFESMLKER EEVTEVAGVP TAHVPLIAAK FMGVDIDFTF ARLALPRVED 180
  181 NLSLEDDNLL RNLDERDVRS LGGSRVTDGI LRLVPNIHVF RMALRCIKLW AQRRAIYSNV 240
  241 MGFLGGVAWA MLTARICQLY PNEAAGAIVS RFFIILYQWK WPQPVLLTQI EDGPLSVRVW 300
  301 NPKLYPSDRL HRMPIITPAY PGMCATHNVS QSTQMVMTSE FKRAAEVVDR VIIGKTNWDE 360
  361 LFAKHDFFFK YKYYLQVIAS SGSADLQLKW HGTVESKIRQ LVMKLELVPT ITCAHPFIKG 420
  421 FDQVSECWND HEVRLVATGD IPEEVAQRTQ KVAALPETDE AKQAAAEEAA RVTEGKEGHR 480
  481 MIYTTTFYIG LSIEPKLAGE GPRKLDISYP TAEFTGKVKQ WEQYDEASMG IVVRHIKWTQ 540
  541 LPGYVFEGGE NRVSAAAVSK VNGKRAKSGN KKKNGSDATT SVGAQAATGQ TNGTYADSDT 600
  601 LTAVDNGDAE MASPTKKQRI VPDTLGATAS TPTLPLQAET ASKELENFQL ATGNHPIAAS 660
  661 TNTAANR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle