YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46101582, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTFESKPLR KSNSWLARLA PQVRRRPLLF FGLPFLATIV GASFGLANLT QTRYDYNATK  60
   61 VQTISKEEEL RMKKDRKRID IREEYFKLQS KQDELDDWEP KRIERPDGVA EWGVAPTMYK 120
  121 SIQTENLSDR DAASEKSNGF SADNVRTSSK QPQVVLGPDG KPCRACNSKL AFAAAMKGAK 180
  181 ASPQSSESRD SIRAKAAVSA AAIAATSSST NACPPDGGEL GRSAWTLLHS AAAYFPEDPS 240
  241 AQQKNSMLAL FRALPHIYPC HSCAEALGEE YQREDKEGGW EDSNLKLASA VRSGPSLRKW 300
  301 LCGIHNEVNQ RLGKPTFACT EAKLSERWLQ GPADGSCD

Type	Start	End	Confidence
Signal Peptide	1	45	0.89
N-region	1	36
H-region	37	42
C-region	43	45
Cleavage Site	45	46
Non-Cytoplasmic	46	338	0.99