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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49078992, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSLAATG LTASKSALQQ QQQQQALLDS SAPSTSTAKS AAPVTRVAIR DGKMIGINDH  60
   61 IYLSPAWAPG AGEPYMIARV MEFVTASSSR SGAAALASSS GTLQVRANVF LRMRDISLRS 120
  121 TNDPRLLVAT MHSDVFSLEN VRGICEVRHR DLIGSGTAPD VTQWKKKEDH FYYYQLYDRY 180
  181 IHRFYDVIPT DKVQNAPPEV LTTLRSRYSF VVAEAGMIND LTDALRGCAV CHRWASGPES 240
  241 VRCDTCKKFF HMKCLNPPLL SKPAKGYSWT CAPCSRRYEQ DVELTLQSGG MLMPSSSSSS 300
  301 ANEVTATNQP RHQITAVANR GRGAPRGRGR QSLTRRGTAT RADDMASASN TPDGSPAPDK 360
  361 TSDDIRGTRC FNRWPYRYFG QHTNAMDVLD LHDSVYPIAT TRLGPKYQAL LPTWEEQVEA 420
  421 GIGVHCRTKE RLKDDEAAAP MVTASEEAAP GSAPVSAGQS GAPASSSHKK KGRPFKRKRE 480
  481 AVERCDTPTT GSSTPAAVAV SLPSEPPEFE RGGDQSVEPF FLPCVAENEE VLNAYVQAVQ 540
  541 AHFKSVPPYH VDLLNRALKT FTEKHGDPVQ ALMSISASTT KQLRIDHWTS KEAKQFESGI 600
  601 AQVNSDMKQL KKFIPTKTVS EIVRYFVVWK MARIKTDLEA MQQQQQQQQQ QEQQQQQHQP 660
  661 QLKTASTGSK KEKTNGAIRA SSNASVPATP KPTTSRAVSP SLSVYGDDAP SGATTSCAMC 720
  721 STTSSRIWYK GPASLANRVL CVNCGIYWRK YAAETFNPDL VSVNTRNKSN TAVVAAANAS 780
  781 GVSEDGLGVA PPSKLARTSR DGKASTPATS PAPIAPPPAP RPEALKCVMC KRIEPKKKLA 840
  841 QCRQCSLSVH QGCYGLTDAE IEMDMWLCDP CNNEQTQEAA LLPRCILCSM AAQQDSAVNS 900
  901 AKHAAAVSGE GKARGRPKAS ASVAAAEEGV KKESTTTAIA PNVIKAPLGA LDAFKPTECN 960
  961 NWAHILCSVF IPEVVYSDTA RLKMVESCGN LPTWRYESLC CICNTPRGAC VSCSEPTCRK1020
 1021 TFHVSCAHNQ QGFTLGFEII PVKSTRREVI STLTFKGETG HMVPQIWCRD HKEVAKSKKL1080
 1081 YDLAEVDQKT ALTSLQMFVR ANKGLNEGSA GEYALLRRAK RYDCLLGAWT PAADATPAVA1140
 1141 NKSLSGDAEP KPKRKSCVGC NTLFSPFWWT LPADANTSVQ AHAHMHTHTH VKAETTDTLA1200
 1201 HQPTSTKPTA SVCCNFCKQT RYQAQFVHVQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle