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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71021963, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSFVITPS SAKFNVALKP ESASPPSLTQ TSSPSSSDST GDDEISAKST ARFGASSHRR  60
   61 AADASNPAAA LQSNPAATAS DFSPSVWGEY PQSIIDDIDA GTIKSKSGFE VMNFASWDNS 120
  121 LTNLGTKSDA DLSMEMDSTS STDYGFSPQS VQSPVSSHNA MHSLTSTSRA MTHDSPEGSD 180
  181 RKTGSAPGHP AAAASTSSFA GSGEDSDAHV AWTGKISDND EAMFDSFVQA GSFGSPAVKS 240
  241 DPFPANGTSG HPFTAMNVPA SSVSAMMPPS APMRVPHSRA PHTNGNSNGN ASPSASSSRR 300
  301 NSGESSEPKK LPGSSSAAAR RTGSQTAVHS NNLDADLGYS AFEVVRPNRE GLKDLQVHIN 360
  361 GVPMHGAKSR VETQIRMRIE LVRPKANSAG GWERIGSFTH IKLPPLSGTK RKSKKYQKSD 420
  421 VPPEKTLFVD ATVVNATPPH DRVHVCKGCR QRERKRAHRK KDPKTPLENR PTEEEMKTLG 480
  481 IDPSSIDAVE RTQARMEEEE KKRVVLFNCG DFVDFEEGEA VLPTRITCYC RHHKEKVGFC 540
  541 VIFTMRDWQG RLIATGSTPP IMITDDHKSM GQAAHAAQAA ASAAASPSAP PSLGIIKQVN 600
  601 GSSPRNSNSN PSQSQEELAS TATSTSGSAT PNGSINPDAP VKHKKERSKP YDGNRRRRNT 660
  661 SGKDLNMTPY SGTGQNTPSV TATSPAPTAS NAADFSSSDF WNAFATAGTA LNGLGRSNST 720
  721 STGTKTPGEA SSVGGSPAPV LQQQALQLPH LSQPMPSQMQ AQLAQLSQGS LSPTTLQTNL 780
  781 ASLPNLDLEQ FFRNAQAGVS SGVDFAQLMA MAAAAALPPH LRPNAGSAVT TPGFAQAPPS 840
  841 GPNHSIEQVP QPKISKLIPG EGPTSGGIEV TVLGENFTEG ITCVFGDVPA ANTKIWASNT 900
  901 LVCLLPPSSS AGPVVVSVKT PGQVTQPPPI NGPLQLFTYI DTTDRALMEL ALQVVGLQMT 960
  961 GQMRSAREVA MRVVGSGGGQ QPGGVPPAFN AGCANGGVSH ADAREAIAGL FTSSSQSFNF1020
 1021 QDTLVQFLSL LDADVSDIEH AEPRADAIRL ANKQGHTLLH LATLMGFHRL VQALISRGCP1080
 1081 LDARDRNGVT ALHFAAIQGR VTIARMLLRA GARDDVADVN GLYAIDLARN HDQVDVEMML1140
 1141 DNTARTGHWQ TRRLTSHAAT SLFYNDDAED IVSDELSSEP SHSDVDDDNV STSFDEYSDD1200
 1201 SASVSGDNAD DNDCRSVSSE AADDLEAREA LSELPVPIID EKASFKAADA RLTEEAIKLP1260
 1261 DVKTISSKEE VLHNSANNKS WLTKAGDTGV DWMNRAFLPH TVAHKFAQLH MPAMPAMPAM1320
 1321 PAIPVFHLAL PAPGFMPWSG SLRADHASEQ SADVKDASTD KGKARLGEAP VEQGWEQDER1380
 1381 GRLLTLWKNI VEEGAWGFNP LYSPPPTYES VAAAEGQTHK TPSAAKPISS SSAAATDSPS1440
 1441 ESSTPTAGPS RRPSARRRSA HVISESPSVS ASTSSSAQTS KSTSSLHASG KGKTLAHGST1500
 1501 SAVARRRKGQ LQLRDDAMLV WFWIPVLLIA AIVLLFSKSS SIFSYADLLS YLDLPAVGRR1560
 1561 

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