YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71021777, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLATRTSTL RSAARYAAAF SNSSNLARVA PLARRTMITT SSATTLLRSR TASPCVATIR  60
   61 STSASQIQKR TMFIQTESTP NEDSLKFLPG RQVMESGTHE FLDTRSSMAS PLAKKLFNIP 120
  121 GVVSVFYGPD FVTVSKDAEH QWSILKPEIY SSIMEFFTSG HPLFTDPESA AGSQDTVILD 180
  181 TDSEVVAMIK ELLDTRVRPA IQEDGGDLEY RGFGEDTDGI VKVKLKGSCR GCDSSTVTLK 240
  241 SGIERMLMHY IPEVKGVEQV LDPEEEIALD EFAKLEQKLE KDRKKERDMG FSL

Type	Start	End	Confidence
Signal Peptide	1	27	0.59
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	293	0.94