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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49077478, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFLGRLSR TPSVHSISSQ ASAAEPLPPK TSDILIKPAP GCTPKPTEPL SAEQQRKLAD  60
   61 LEKYVRQIAK EQPPKDDYKT WEDKWLNEPN LYQRYLRAAK GDLDNAKKRI KSTLDWRRDF 120
  121 RPEIIAPGSV AKEAETGKQI VSGFDNDGRP LIYLRPAREN TTPSDAQVRY LVWTLERAID 180
  181 LMPPGVENYA IIIDYHKATT QSNPSLSTAR AVANILQNHY VERLGRAFIV NVPWFINAFF 240
  241 SAIVPFLDPV TKDKIRFNAN LVDFVPADQL DAEFTGGRYN YEWDFEKYWN TLIKVGDIAE 300
  301 DGTRKTNSAA DAQSAQQPKP DETEADAVQK HADAIAASQL TEQGSAIGLG AAAGATTALA 360
  361 VVAGGAAAAA TDAYASDTKT SSSAYKYLQS TSDYEELLSK YDTFLFDCDG VLWSGDETIP 420
  421 HVVSVLQKLR QRGKSVIFVT NNASKSRQTY LKKFASMNIQ ASLDEVFSSS YASAVYLKKV 480
  481 LNFPADRKVY VIGMHGIEEE LDAENILHCG GTDAQDNKFL PALDFGSLQT DEAIDPKVGA 540
  541 VVCGFDMHMS YLKLAKAFKH LTRPGFDGPV EAEGMGGGCH FILTNDDSTF PAKGGPWPGA 600
  601 GSLSAPLIFS TKRTPTIVGK PHKPMLDCII ATKQFDPKRA IMVGDRLNTD IEFAKAGGIA 660
  661 SMLVLTGISK RDEIEGPHAK TIPDYLIDSL GDLDAVP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle