YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71020741, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLMLAFIL HTQSTTHDHL GVIVSTWDFG SSSSARRYTL SHAFPERLGD WSVDADLCEP  60
   61 IMSTTHRPTF TAAKGRESNA HLSQQRSVLS IPQHTKLKLR RPALSSAEGV AATHAAGTRR 120
  121 DLKRELEHAE WSAKNKKRIN DGLPPLALPH SSPTVQDEQR TSAIEQAIQL ELDRSSASEE 180
  181 SHAHSSSESD DESSDSPSAS DEQHALLLEL QKIKSERAAQ HAALHRQADA SASISRDHEL 240
  241 AHANPLLNLH HALDASASTP TSDTSPHFTI HNRWDHDVIF KNQATTSTNA HSAPSFINDL 300
  301 TRSDFHKKFM NRYIK

Type	Start	End	Confidence
Signal Peptide	1	16	0.77
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	315	0.99