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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71021005, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSDGKLPRY LYMRRFVLRS IHIARLAGRA ILVGFTWLAL LPYININVWR FWFWCIDYAI  60
   61 LYWFVDVATR LGMTGLVVPY ATEAAPPANS SLPQILNRTS STSSKDLDSL PKFSILDAWS 120
  121 RLGSPLPTAT LAQTPTSITS VKAALHSLVQ KLAHDVFQGQ ILSCVIVVFF VGVFLLREWI 180
  181 LQNMPQNFDP QPNLDQLEPA QPLPDVPEPQ PHTEREPDLE QRRDQLADLP ARIPTPEDYQ 240
  241 DAPYEGANVH EAERSDELDL DPETQREQAR LARIRRLEQV TSAQQEENLA SPLIVATDTA 300
  301 SGLNNASLEA DNVAATQAGS SEVRVESQQL DSPADVFEFT STQNLRDALG WSETPHFTFE 360
  361 RAQAVSPDER LREADVPAEA PLEAQQYPSD ASNTVHHGAS SSSSTEPSAS SELAARDTAD 420
  421 APVATEEAQS SPRPSTEADV QVDTNIAPLD DVPDEQDDDD AWQDESDDDE LAAPLQLDGA 480
  481 DEAALRAAAA AAFPPPIAHP VAADDEIEIM ANAAGAGAEP DDPEAEIGLA EEMDGILEAI 540
  541 GMRGPIFGII QNLFLMIFLS FFVMQVFVMV PYVVGRLFGS GPGLIRVLAL PVKALRYVTD 600
  601 PVFDGLIAVG AKSWPKLIGV VGASGARKGS GGTVGLQSSL SGWIPSSLSN MFSQTAAKAT 660
  661 TGVGAQGVSS ATSAKSSAVA SMLASVLPAR VTTSLQWKAV SNAFEVALAT GFPGTVERMT 720
  721 DAICDVFTRI DSYRLVTTTT DRAVCVAFGH AYWLLILIVH QRLSKPELHR AVGEQSTLKM 780
  781 LMGQHVLIIK AISFIFIELI VFPLGCGLLF DICTMPFLAQ ASIASWPDKA WAAPLSFAFT 840
  841 RWMGGTIYMF VFAQYVSATR KVLRPGVLCW IRDPNDPSFH PIREILDKKS WTQLRKIAAS 900
  901 AVMYAAILVA SIGVNTYFLR YVMGWTGVLP LRWRPFDPWT EVPVDLLLVH FALPWATQRV 960
  961 NPDKLAEKWL TRWWRGASRM LRLSSYMLGG EFKEERRRVR GNALVNAWNA WMNRRVRDED1020
 1021 YVDDGLFCSV PADDKAITSG PLIIPMNADG SPATERMAEA YLKQQADAQK HTPKPTYTLI1080
 1081 YLPSNYRVRI TTIVTLLWLS HCALFMLGLS IPLLIGRAMS GVLTAREVHD LYSFGIGITV1140
 1141 LVVSAKLYRG VRKTWMRRTT RARYIRTTPR MYVAIRVMVE MKRMFKSMLL LAGMAGVVPL1200
 1201 VIGLVVDQYV LVPLRYRSTQ VAVLHLGHIW ACGVVQARLL LFTTRMLGVP GRGWYARFMD1260
 1261 DVDEVVRGGV YPRPKVRLAW KRVVAPVGMG GLVMLAIPVG VAYGLATSGW VHVETRQQEQ1320
 1321 LLLRKTIGAL QSAMLVTALR AALINSMDGW TELLKDEVFL ESTELINYEE IVANRNARAV1380
 1381 HDAQADAPRA TTADVQDAQD AQDAENADNA AAADADADAD AADAHAGYVA QGTLPDVLFR1440
 1441 

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