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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49076440, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKEVSSAVE FDAELNAAGS KLVVVDFHAT WCGPCKVIAP IFQRLASQYT SVVFLKVDVD  60
   61 RVQPVAQRYS VCAMPTFLFL KNKSVVDTLQ GADPNRLTAL VKQHSSGASL AFSGSGQTLS 120
  121 GGSSSSSSSF GARVAGITDG HSSLLNTVEP KRSSALNEKP NHRLQDILGG PTGGKWLESD 180
  181 ADEQLLIHFT FKQQVKLSGI LLRTLPSQLA HAPKEIKIFA NRPGLSFDDA TADKGDQEAE 240
  241 LSEDFVRGGE NGGGGKALSL RFVKFQKVDS LTIAVLTNQS DAETTRIDAI DLYGVADQTT 300
  301 DMSELQKIAA EGGDRDFDFR TASKTGLKGG SSSRSARTGF HGPRSSSIPD MSTPAEPPLR 360
  361 PARSHSTSSL NSALPRYRRT TSSTSVPPMQ HVDEEDGNDY ADDGNYSRHS QPQTAFVPQA 420
  421 PPSLSEEEQA EFEAAQKAAS ETLGGWHYAP LAVALAPPLG SLLGGHSDAW SDAILLILAS 480
  481 FWLYQFLRVP WEIYYASRTR SILTHDQDQD EIEHAEQVTL DGSPSSAPES SETGVQKEVR 540
  541 RAAAAELRRS ELLSLVFCML SPIMGAYMLH WMRETMTDGN KYLNTFNIRL FTLAAGIKPW 600
  601 SHAMSLVRRR MLHLQEEVHY PSSKVEKMNQ RLRRLEADLS SLRKLYATKT ELRLLREHDA 660
  661 ELGRALRRSE RKEEHLRLSA EEKFSIVEGR LEDLLREVAI NAELIEEERR ERERAASLRI 720
  721 SLFEAIKYLL GSGLTIRRAS PKHYLHDMPR SLPSTASLGI GAQSAEADLN MEAHTPGAPL 780
  781 PASVPIVSPT RPPRTIASAT PDRPSSSSRG LASIQSEQPA AANVVNRPDH PKVGAVVERS 840
  841 RSRNNAHHIS DPWWERGAAF YLFLPLNVSS AAVRFAGEKV KHILEDSENE AARNQRKTLQ 900
  901 YQKHLADQQL QQHQRKISQK QYQHQPMLSP TRNRADASTI KIASASANPR TR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle