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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71020313, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHTHTHRAT REKARRKGGT RELRCLSRRD RDECGGKGGG QSESCNSPHK LTEDVRETEP  60
   61 LRSESLSDIP DLLICHLAPA HLPCPHTITH TVQVAYTTTR SFLHDGDGHD DNGTKDKLII 120
  121 ARLQTTLAAD RQTMPLLRAI VEDLPLWPAG EMLLAKQPQR ESPEGSGSGR SLPIPLLVVS 180
  181 TLSAIFASIF SVYLIWKQLK NYRKPTLQRY VVRLLLMVPI YSIASVISLY SLQLADIIDL 240
  241 FRDLYEAFVI YCFFNLLIEY LGGERSLIVL LHGRRPQEHL FPANLFLHDM DASDPYTFLA 300
  301 LKRGVLQYVQ VKPVLALATL ILKAAGKYEE GKISASNGYT WVSFTYNVSV FLSLYCLGMF 360
  361 WKCLNDDLKP FRVTSKFLCI KGIIFFSFWQ GLGISILVAA GLIKKVGPIY DPDYISMAIQ 420
  421 DFMICLEMPI FSLGHAWAFS HTDYIDPFAH YAARLPVYYA LRDCIGMYDV FSDSLTTVRG 480
  481 TGYVYQTFEP SEGVIHQPLA RERRSKAGLR YTQGGKGKYW LPQRGTGDIR DATRGARHQG 540
  541 PLKKLRRYIN DKRMQLEGYA PLTPQEADDI IHDDPDVAQE QATSERSPLL RNPKDAARSA 600
  601 VRHAGEGLDF FAERRLDSDE EAEDLRFDDP DEEEEDAYHK SRTLHFGDYA YPNIDINREQ 660
  661 ARNTRWQQDD EIVHRRRRKG TISKKNESEG AKKKLGEDQV IDGDVSGSVH EPDKSNGEAG 720
  721 RTSKGKAKKE ADRANVKTKK RTAQEGNSGN GSTDAERKSK SAWLAWDRET DNYREAWQSN 780
  781 ASANGAETQQ AEGSASQASA EHSKSSPKLD PYGAVDLVVE DYKAEERERL LERRRGDPAL 840
  841 RAGKGTRIFR KQYTPSASGA STPPGERKRS AAIVEREGSP NTPLNPPSST AAAVTVRSPQ 900
  901 TEANPERSKV ELQDSTEHGN ASNTGDESGD VLISRELDVQ NNEAFLKGRV LFPEPRRSMD 960
  961 EDDGQNPWT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle