YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46100036, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSARRSSQV AKAPAAASTS SAAAATSVPT SAEAGLSTSA KQQDMQKEEA STDAHLELLT  60
   61 EHFGYNPKSF IDALVYLSNE HLYSIATEFE NVVLDLLKHV DGGELEAEQG MHAILTLMEN 120
  121 SLDHTLDTFE LYCFRSVFGI RSRQAKYMTL DHHRGLDLRT RQPGASSSSK GQNKSARKSV 180
  181 AGTPTAASAS QRSYQLGETE DSLKRQIAAA RATQHKLVLA KNATQESLNR MLDLAERFSA 240
  241 ILYADSNDVS ACGSHVKSTM SVLTETLGQH ARKLKADTIP LLRALQELRS TDPLGEPLYS 300
  301 GGVRAGDKEA GDADADDDAV VATDVRAWEG GRENYLNWEA DRIITESKRS GAATGAAASA 360
  361 SVASGGASRA NNDAQVAAQD ATLAADDDSK TPKRKRSAAQ PSSSKRKTPA TATRSRG

Type	Start	End	Confidence
Signal Peptide	1	34	0.96
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	417	0.99