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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46100025, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSCSYLA VKSFAWASGS LAVAARARPA LRPANQSDVL HIFVPGLKPA SSHFSTAITK  60
   61 HYHQRRKVEQ TQALLHRRFV RYHSTETQQH SSTSSSSNSH IYAPPATLSK DANSTASSSY 120
  121 QGQSAGAPPK APVSISPLPA STNTAAELGS PANQTSASQT MLAEQKPKEK ELVDAKTPKG 180
  181 PLTTRIWAKV KEEALHYWHG SKLLAKEVKI SSRLLRRLML GYSLTRREKR QLKRTFADLL 240
  241 RLIPFIPFIV IPAGELLLPV AIKIFPNMLP STFESKFSVE EKRRGLIKVR LEMAKFLQET 300
  301 IKEGGLQATD KVKTSEEFKE FFRKVRSTGE SPSNQDIIKV AQLFEDDLTL DNLTRPQLVS 360
  361 VCRYMQIHAF GTDNYLRYQI RHKLNRIRQD DIVIGHEGVD NLSQAELVSA CQNRGIQTTN 420
  421 LSEDRLRQEL QQWIDLHVRN KISGTLLVLS KAFNYVAAGN NDMNAQSHLR SLELTLSSLP 480
  481 DNLVNEAELS VNSEGATNKQ RLEVLQQQEE LIEDEAEQEQ EEAAAREADK ERRNAEKARL 540
  541 AREEEEARSL LPKKETDSAL EDPRMTNEQL TELGEALSIL SAKSSVLKER EELRQLIEEV 600
  601 SGSEATAAED KASSATSASS SADTSSSSSV TDADKTDSSS APTSSSARSM TKRIKSMLEK 660
  661 IDNQLEEYDR DVGSRMHLIE ASHTGKISVD DLEQALRLIK HKPEDEVIEK IVDKLDVDHD 720
  721 GLVPLDDVLE LARAESGLGI LRDQGVRQIH AQGKQIRDGD ALKPKKSDIV EV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle