YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46100004, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPALTASCS RCLSSTLNLS SLSAALPSTS YGRLHMQTLS TIQSQQKSSF STSSILSESR  60
   61 KKRTARLKRK SNLDQRILKV RMLESSKPDA VLGHQPTPDG QKVWTDSELA QIILDKQTVW 120
  121 GVHEDRRGNL VPISADQQAA SAKNTFDAVA AKQAASMGGP LRLNFGLDGS DRQLLFQDLP 180
  181 QVMVKDRILD SWNLGTLIRG TANQADVAAF ESEYAKVQSE ECASKESLAR ILDLRNASGK 240
  241 GIQVENIRRI LAHFGGENDT GSPEVQAAVL TYRIRNLHEH LQTNRHDNSN RRSMSLLTHQ 300
  301 RAKILKYLKA KSPQRYHAIL PRIGIQARAV EGEIVVPGKP KIARA

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	345	0.99