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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71019369, gi|...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVLVRFTI RDSIHDFEKK LHCIHDLGGF FFTDFLLLLV LDVIVNIVII SYCQNMSSEA  60
   61 SLQAAEAGLF APAEAPIMAE AGPSTSNPTP VHGKQQSRPN QPKQRPRNSN PSHRLTSEQL 120
  121 RRRLHYIASG STVILKLPSG RTKAAEIMPG KQVSLGKFGS FQADDLIGMP YGFTYEIQPD 180
  181 AAPANQKDGS LKQDKKSGKR DGASASGRGG SLKLVMNRTL GDIETEASET IETTATNEHI 240
  241 NDDGCAQKLT YVDIQALKEQ GISGREIIEQ QLAGSESFAN RTVYSQAKYV ARKEQKHLKL 300
  301 FTPLQPEFGN VCDFWFDKAP DKIRWIRKDA LSQVLSFGSV RPGGRYLVVD GVSGLLVGAV 360
  361 LERMGGDGTV IAINDAESPP SLDILAYFNL PTQVTKPVLK VINWAATEQD YAPVFSNQDI 420
  421 NSASSTSRSV KDKQRDRKRQ ATFREVDRVR SDFFAGDFDA VLIACHYDPM SIVRRLKPHL 480
  481 GGSSSVVVHS PYLQPLVEAH AQLRGDEEFI NISITEPWLR KYQVLPGRTH PEMTTSSTAG 540
  541 FILHALRVFG EEQALEMRKE YLVSLKQGGT FEAETAEATG KDEETVKRAP EDVAVEAEQE 600
  601 RDAKRARTEG TNVTGPVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle