YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CCR4_USTMA
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPGGLHSA HLSSSASRSE AVANAANAAA AAAAAASGSP HWQQQIVKAE ISRQSNSPHH  60
   61 HARAAALAAR SATSSAIAIQ DPSKGIVTPQ VAANGLFVAK KDSSAANGGG ADDGKGSGAD 120
  121 TAPATTNGAA PISSTSAKDK QTWSTIDMGG LALKNIANEV YRYSFLTSLF INHNALTTLS 180
  181 SDIVKLRHLT VLDASGNKLS SVPPELGMLT SLRELFLFDN NLATLPPELG TLHQLEMLGV 240
  241 EGNPLQDNLR SLLQREGTTA VIAYLRDSCP VPLPPPEREW IMIDPDLPDL DADKHANDAT 300
  301 QESFNVLSYN ILFDRYATAQ MYGYTPSWAL AWDYRKEFIL QEVMSYSADI CCLQEVGVEQ 360
  361 YEDYFLHHLS QQDYEGVFYP KSRARTMRDD ERRRVDGCAI FYKSNKYQLI EKQLVEFNQI 420
  421 ALQRPDFKKS EDMYNRVMTK DNIAVIALLE NKLSGSRIVV ANVHTHWDPA FRDVKLVQVA 480
  481 MLMDEVEKAG ARFAKLPPKP SVAEGYPPPP KYTHANQIPT IICGDFNSVP ETGVYDFLAN 540
  541 GAVPGDHEDF MDHVYGNYTA QGLQHSYKLE SSYVPIGELP FTNYTPGYEG AIDYIFYTKN 600
  601 TLSVTGVLGE IDKQYLSKVV GFPNAHFPSD HICIMSEFNV KRSDRGSSST TAREVHHPTS 660
  661 SSNASSMPRR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle