YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49072848, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPDESSGEQ LLNPDSSSQH SIGASDYISI ASNGNASTSD YSQPGRLSHE TLRREHHPDV  60
   61 SLSLSRPPDS VSNDNSIDYN TSQINHLEDT IHDAVSHVLP EDITGQPLFS HSRESTVEPP 120
  121 DVKEHSGQDL VPAEDDEDVW EDEEDSILMD ENGNIVYEGS SYEDTASDFS NDADAEELKQ 180
  181 HRRTYREATQ QYRKSRRALL LSGFSSFASS PSSEELGTVS PTERDNSSQS PPASIYNPRR 240
  241 SSNAQDSYYQ PHLAEAVDSA DAGGRADGLR FDYDSGGDTS RYVRASESHA HTPPQIKPEP 300
  301 QDFSKHAQVL DNEAFLTPTG IPSNQKTPNG KFIDSHLMNG AVFDQHCARP FPPARTHSSR 360
  361 LSQSTLMTPS PAQRAGEISS EGLQKRHSSQ DLTPSPPILE HEAREPTEAY QTPRSSFAAV 420
  421 CEDIKFDRSI MQDPLFEQRN KEEQTGPDAA TVPRRQDHTP FSLWDYLKEE VLATDFDATQ 480
  481 EMKWERVTNF ISIPFWMEKI IMFGFIVCLD SFLYTFTILP LRFGVAMWAW ISNSARWILG 540
  541 GQKRYLHSSH KCDILKMLLI ILTCFILSRI TDASKMYHSV RGQDVVKLSV IFNVLEIADR 600
  601 LCCSFGQDLL DSLFSRSTLA RRKNGKQPYL RPIGFFCLSL SYVLAHTLVL FYQLVTLNVA 660
  661 INSYDNALLT LLLSNQFVEI KSSVFKKFEK ENVFQMTCAD IVERFQLTLM LSAIGLRNLI 720
  721 ELSGGSVEPS ASPLPASFTV FPSLSLLETV LTPVCIVLAS ECIVDWLKHA FITKFNHIRP 780
  781 AVYGRFMDVL CRDLVVGGPS SKENSRKHTF VDQSPIISRR LGFAALPLAC LLVRLILQII 840
  841 SMIGDTSHID EFIDPVSPRI SETGWIGVVA RKLGASDIDN DWVRALDLFV RGSAWALTLV 900
  901 LAWAFLVAIK LLLGTNLVSF ASHRYATMHE REREEDLNAR DRAPIGTNKD ERSYEKSLGR 960
  961 FIDKPDDDAI LIKLDGTHVP PTPKDKDKAK DGGQQKAKQE NSLMEVSRYN MVRSRIW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle