YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71017833, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFASRSSAF SAIRQLGSGP AVASSSQSVV AAFSTSASSS YATPTADATA RKPPYSAASE  60
   61 ASPAPTDLNA IGRGRKSAGR GRPKMLAPFD EWIQSDARAY KQPKPGMGPN WIGDTPFPLN 120
  121 PSFNPPAPIR QSTKTEIWRL HASDPKEWTI RALSEKFSIG LQRTEAILRL KALESEWTSK 180
  181 NKPLQSEFQS NMDRLLGAQD RKRMPESEPS VQSTSKSMRG AQHEEFSEAD SLDAPSVIAP 240
  241 AMAEESLKRA SMIAALPSGG PDVDAKSSTK VIKTQRAPLS ITKVSGDSYK GAGRVERNVR 300
  301 RAEKRKGPKA HARSNK

Type	Start	End	Confidence
Signal Peptide	1	31	0.97
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	316	0.99