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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49071580, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSFLRDAA AIASTICHIA KGVVLSPNGA NPAARRGPPR PWSTQAVARD SAPGNNDGAS  60
   61 HSQLHVSINQ DERTSADFIQ NDTPPPSRPW PSKSTKTTAA LTPEVPLTNA PEPSAEASST 120
  121 SAIPLKPPTP TSIPTPPVAL HDTEDDIPKK PAQPSQAPLS KSQTPPVDDM TGGRSPSHHD 180
  181 TIQATTDSPF QTVKSSVDKL ETPPIPDVPS FDLEEYDAVK ESKHVPLRAA KVPSSRLGRL 240
  241 FHYGGLGAGL AFGAAGSLLR GASSSGADGN ATGNLFMSEQ NVARLVDKLS TMRGAALKLG 300
  301 QFLSIQETKL LPPQIEQVLL RVQNSANYMP VWQMNKVMSQ ELGGSDWRQR HFKEFEDIPF 360
  361 ASASIGQVHS AVLRDDFVDP SMAGQRVAVK VQFPGVLESI DSDLSYLRWL VSASALLPKG 420
  421 LFLENTLRVL GRELKDECDY KREAEMGRRF GEILQDSPEF EVPKVVDSLS TGKVLTTQMM 480
  481 RGRPLSQASR YPQATRDRIA QSILKLSLSE LFRFRLMQTD PNWSNFLYNE RTGKIQLIDF 540
  541 GATREYSKEF MDNWLYMLQA AIDGNYDECL TWSRKVGYLT GNESKAMERA HVDSMIALGE 600
  601 PFRADAPDPY PFEHQTITDR VKAQIPLMLR ERLTPPPQET YSLNRKLSGA FLLCARLKAH 660
  661 VSCSSLFEAV KADYRFGPES KDVHAQAGRT AGRTGAVASP PQANSPFNSS EQRRYFHSVF 720
  721 RAAQLQQDQR TRRKHGRNLI DRFPRSKIML SSDQGSKVGS CEVGDSVESL AANPTGSSSI 780
  781 QETPVDAVEP ESKFGINLER QATPAEVTTA PTTEAVLTCS ESQSSLGSTT IRGIAIPLKP 840
  841 PPPGPEECCM SGCAHCAYDI YAEDLQDFHS RLSSVRTQLA QLSPPVTREE WRQDLLGDYP 900
  901 SSDSEAGGSE DDMKERAQRE VDRVISDLDP TMKAFLEMER KLKKQEQQMG KQSQAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle