YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46098154, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTESNYRS ELSGFRWAQG RTDDSRPQNT SSGPTSYLST ITNSISGYVP LRSNERTNEE  60
   61 EAYLSLSRWE RFLGFLACIA GAAVCFFFSF IFLSPPILAL RPQKFALAFS LGSMLFMIGF 120
  121 SVLSGPLAHL KHICSKERLP FSIAYFSSLA LTIYFAVGPR KMLPTMVFAI VQVGALLTYL 180
  181 AAYFPGGTTT LRYGASMLMR GDPDRTHVKS YAGCTTGGQG EENKNLKASV KVMEESSHSV 240
  241 GPML

Type	Start	End	Confidence
Cytoplasmic	1	71	0.98
Transmembrane Helix	72	93	0.94
Non-Cytoplasmic	94	104	0.80
Transmembrane Helix	105	128	0.89
Cytoplasmic	129	138	0.87
Transmembrane Helix	139	158	0.93
Non-Cytoplasmic	159	167	0.75
Transmembrane Helix	168	190	0.86
Cytoplasmic	191	244	0.96