YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46098065, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVCACHLL WSMPQLLTSE PYISIQRDNH SSISSTRDST TSKNCPLIRF SPSVRSSLFA  60
   61 GTLAMFRPST SLALRSTLRQ LASASNQPIP PGSEINAVKR TVATILPPIR LYRRIIRAHR 120
  121 RLDPDMRAVG DNYVKDEFRR HKNIDNPLQI IGFLSSWKMY LDQLEVQQGQ PGGFRGQRLD 180
  181 PQLLEKMSDE QIYQIHELMT ATQEAYSDKA QAFPPEKQRE LAEKAAADAG LSVKKDE

Type	Start	End	Confidence
Signal Peptide	1	18	0.73
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	237	0.99