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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71010843, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQSAHDLA LLYSLQLVRQ LSTTSSAAGI SARLRKQWRG PSRPQTASAS ASSSSSSTAS  60
   61 SATASASSSP ETAPSPHSSA SSRQRHSAFR ALRQSSRPNV QTSSSVSSSL KFIESARKGK 120
  121 ERDSSHPRTA SSAADHSASL IKELHALDDQ LDALQSQAFS ISQRLRKLAS RRSSSADQLE 180
  181 ETWGPDRLSA PCRAETRENE SKAIWSASGS ASESSSSSRR TADKSSADEP KTKLLFGNEL 240
  241 LASSNLRWRD GKGKLIQSLV YSGPFADEQK KWTESITGSV TPKSVPVDKV APLREMQVAT 300
  301 LAHGLDRVLF NPGIYWLRDP RSGIYNFDPR IKDILDVDLF DYAALPPYVT SSMDPELATL 360
  361 TQRHQKKYCG STSSMTSLLS QCYFLISGWR NPDVSGFSAP FAGLPSGFSV GAKLPASIVL 420
  421 HYKDGYYAID ADKTAAGEAE NSNYVLTSLG KSMEKMLTAT PEEYAKYMRI NSCKLTQEEK 480
  481 TKPEAYHYAC TDKIMMRSQL DCHDDRLPRK TFDLKTRASI GIRNDRANYV EGSGYQIRRA 540
  541 TGVLESFERE YFDMIRAAFL KYNFQARIGH MDGIFVAYHT TSTIFGFQYI PVEEMNERLF 600
  601 GSQQMADQAF KLSLGVMEKV LDAATSMFVE QTLKITVETK EKGDVGMTVY VEPADASSWS 660
  661 HRQAERKRTI AQLDISVDRY LDGGLMLGPV DFSYLPGRRI DPLSDDEIER RMRASLPAVR 720
  721 WEIDYSISPR PDLTESKIRS NLEAVRAKQA SLNSLILPNV EALNAREQYR TEQLAKNPDA 780
  781 LQRFLQERKS GVAAGMPLAP GQLSAENAAS QSPSTPPPAE TSDASSSNTV LPDDVLKPIE 840
  841 PNDTSPRRKQ AESRFVRMRN ARTLRLRELA KLGAKDANHN KSLDKLILYQ PRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle