YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46097828, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIPVRCFSC GKVIGDKWNA YLALLLDGRT EGEALTELDL KRYCCRRMVL THVDLIEKLL  60
   61 HYNTGSQKTW IDMAVLLPTL YSSRAQSSGM KLLHPSPCPS YVLITSLYSS ICSLLSAITL 120
  121 LDSSRVQSDR NLTTSAQHAY TSHTTSAKHK RTGTQ

Type	Start	End	Confidence
Cytoplasmic	1	99	0.51
Transmembrane Helix	100	120	0.58
Non-Cytoplasmic	121	155	0.88